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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_56477_56963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56477 - 56963

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTGTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TATATCTGAATG

Flanking Amino Acid:

ADVRLMKRKTGVSRGFAFVE

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

0.41

0.9

58.9

42.4

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

57.7

0.1

1.5

62.08

39.7

Associated Gene:

Gene:

RBM5

Ensembl Gene ID:

ENSAPLG00000011176

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025980

53286 - 67945

14660

ENSAPLT00000011724

53286 - 68197

14912