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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_57038_59329_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57038 - 59329

Intron Length:

2292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGCTTCA

5'SS Class:

weak_major

3'SS Sequence:

CCTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

AATAACTGAAAC

Flanking Amino Acid:

DATSWMEANQKKLVIQGKQI

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.4

60.7

40.9

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

91.5

0.93

0.6

87.3

Minor 5ss

-1

2.8

51.4

Minor BPS

48.1

-0.1

1.7

59.03

38.4

Associated Gene:

Gene:

RBM5

Ensembl Gene ID:

ENSAPLG00000011176

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025980

53286 - 67945

14660

ENSAPLT00000011724

53286 - 68197

14912