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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_6005_6178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6005 - 6178

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

ACTTTGTTACAG

Flanking Amino Acid:

CTFISMLAQEGMLASLVEQN

Intron Amino Acid Position:

904

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.6

33.4

Major BPS

71.4

0.53

1.2

63.4

Major PPT

80.2

0.68

0.8

73.8

31.3

Minor 5ss

34.2

-1.8

3.2

47.6

47.9

Minor BPS

43.1

-0.6

2.3

49.89

44.3

Associated Gene:

Gene:

SEMA3G

Ensembl Gene ID:

ENSAPLG00000012760

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022242

5871 - 29342

23472

ENSAPLT00000021381

5871 - 30507

24637