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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_61271_62133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61271 - 62133

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGCC

5'SS Class:

major

3'SS Sequence:

TTTCTCGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

CCTTTCATAATA

Flanking Amino Acid:

FAFVQLSSAMDASQLLQILQ

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

64.2

35.7

Major BPS

0.75

78.6

Major PPT

81.7

0.71

0.8

77.3

31.4

Minor 5ss

25.2

-2.9

3.3

37.1

Minor BPS

59.5

0.3

1.6

67.2

Associated Gene:

Gene:

RBM5

Ensembl Gene ID:

ENSAPLG00000011176

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025980

53286 - 67945

14660

ENSAPLT00000011724

53286 - 68197

14912