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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_6252_6701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6252 - 6701

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTATTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

TATGTATGAATC

Flanking Amino Acid:

EEVEKRKKFKIDDQRRTHNY

Intron Amino Acid Position:

880

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

79.6

0.67

0.8

74.5

34.6

Minor 5ss

44.5

-0.6

2.7

57.3

47.4

Minor BPS

48.4

-0.1

1.8

61.2

Associated Gene:

Gene:

SEMA3G

Ensembl Gene ID:

ENSAPLG00000012760

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022242

5871 - 29342

23472

ENSAPLT00000021381

5871 - 30507

24637