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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_64222_64477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64222 - 64477

Intron Length:

256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTTAACTGAAAT

Flanking Amino Acid:

PTGVVPGTKYAVPDTSTYQY

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

92.4

0.95

0.7

88.3

28.9

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

58.2

0.34

1.8

80.8

39.8

Associated Gene:

Gene:

RBM5

Ensembl Gene ID:

ENSAPLG00000011176

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025980

53286 - 67945

14660

ENSAPLT00000011724

53286 - 68197

14912