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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_91837_92355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

91837 - 92355

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAG

U12 Branch Point Sequence:

GCCTTCCCAGCT

Flanking Amino Acid:

ECILSGKNSNGECGNFIRLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

49.3

-0

1.7

66.4

42.2

Major PPT

83.2

0.75

0.7

32.5

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

42.6

-0.4

57.16

45.3

Associated Gene:

Gene:

SEMA3F

Ensembl Gene ID:

ENSAPLG00000008161

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023587

90970 - 101107

10138

ENSAPLT00000008575

90970 - 101006

10037