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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_97025_97118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97025 - 97118

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGCGTGCA

5'SS Class:

major

3'SS Sequence:

CCCTGTGCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATCAT

U12 Branch Point Sequence:

TGAGCATCATCC

Flanking Amino Acid:

VYSRIGRICLNDDGGHCCLV

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

35.9

Major BPS

57.9

0.2

1.4

44.2

Major PPT

66.7

0.38

0.9

60.2

35.4

Minor 5ss

26.6

-2.7

3.1

29.3

38.1

Minor BPS

43.1

-0.5

53.84

43.3

Associated Gene:

Gene:

SEMA3F

Ensembl Gene ID:

ENSAPLG00000008161

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023587

90970 - 101107

10138

ENSAPLT00000008575

90970 - 101006

10037