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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_98838_99072_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

98838 - 99072

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

CTGCCCCCATCT

Flanking Amino Acid:

LMLEEIEVFKVPAPIKTMTI

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

52.4

0.06

1.3

41.7

Major PPT

0.32

0.9

55.1

35.5

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

43.9

-0.3

2.1

62.54

46.9

Associated Gene:

Gene:

SEMA3F

Ensembl Gene ID:

ENSAPLG00000008161

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023587

90970 - 101107

10138

ENSAPLT00000008575

90970 - 101006

10037