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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_99115_99367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99115 - 99367

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAC

U12 Branch Point Sequence:

AACATCTTACCC

Flanking Amino Acid:

IKTMTISSKRQQLYVSSAVG

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.5

38.7

Major BPS

72.7

0.56

0.9

63.4

35.2

Major PPT

0.34

0.9

58.6

31.7

Minor 5ss

26.2

-2.7

2.9

22.7

37.4

Minor BPS

51.2

0.02

1.7

58.11

40.6

Associated Gene:

Gene:

SEMA3F

Ensembl Gene ID:

ENSAPLG00000008161

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023587

90970 - 101107

10138

ENSAPLT00000008575

90970 - 101006

10037