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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_99669_100366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99669 - 100366

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

CCTGCCACCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACACAT

U12 Branch Point Sequence:

TGCCCTGCCACC

Flanking Amino Acid:

MRQCRGYNSNANKNAVEAVQ

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

56.6

42.5

Major BPS

52.1

0.05

1.2

37.5

Major PPT

65.8

0.36

0.9

58.4

31.5

Minor 5ss

23.3

-3.1

3.2

25.4

39.4

Minor BPS

38.2

-0.9

2.3

48.24

41.8

Associated Gene:

Gene:

SEMA3F

Ensembl Gene ID:

ENSAPLG00000008161

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023587

90970 - 101107

10138

ENSAPLT00000008575

90970 - 101006

10037