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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009640.1_886_1250_R

Intron Information:

Intron Rank:

131773

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

886 - 1250

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

GATCCCCTACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GATCCCCTACAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

64.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

53.5

0.08

1.1

50.5

Minor 5ss

24.2

-3

3.2

26.5

Minor BPS

45.5

-0.3

57.54

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018103

Chromosome:

PEDO01009640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029602

496 - 1367

872

ENSAPLT00000028752

21 - 1367

1347