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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009651.1_382_1542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

382 - 1542

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CAAACCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCAAA

U12 Branch Point Sequence:

CCGACCCAAACC

Flanking Amino Acid:

GEIVTTIPTIGFNVETVEYK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

46.5

-0.2

1.2

50.7

31.8

Major PPT

66.7

0.38

0.9

58.5

37.6

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

44.7

-0.4

51.22

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026528

Chromosome:

PEDO01009651.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018337

178 - 1633

1456