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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009672.1_353_442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

353 - 442

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGCCTC

5'SS Class:

major

3'SS Sequence:

CCTCTTCGTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CTCTTCGTCAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.33

1.4

58.6

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

64.8

0.33

1.1

63.2

37.4

Minor 5ss

36.5

-1.5

3.3

50.5

46.1

Minor BPS

40.5

-0.8

2.4

47.05

46.3

Associated Gene:

Gene:

TRAPPC5

Ensembl Gene ID:

ENSAPLG00000030219

Chromosome:

PEDO01009672.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043990

21 - 2980

2960