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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009695.1_2420_2858_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2420 - 2858

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCAAGCTAA

5'SS Class:

weak_major

3'SS Sequence:

CATTTCAGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CATTTCAGAACA

Flanking Amino Acid:

IHDFNSSAAEVSDLEGSDGC

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.5

40.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

64.1

0.32

1.1

59.2

40.3

Minor 5ss

34.8

-1.7

4.1

47.1

48.3

Minor BPS

0.09

1.8

66.23

39.7

Associated Gene:

Gene:

PUS1

Ensembl Gene ID:

ENSAPLG00000015695

Chromosome:

PEDO01009695.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016354

2374 - 4272

1899