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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009727.1_39293_39579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39293 - 39579

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGCGT

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTCGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

CGTGCCACCACC

Flanking Amino Acid:

QPCQETPPGLVGRLLIEFSS

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

69.5

42.7

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

70.8

0.47

36.3

Minor 5ss

-2.6

3.3

38.6

46.5

Minor BPS

41.4

-0.6

2.2

52.11

44.8

Associated Gene:

Gene:

B4GALT2

Ensembl Gene ID:

ENSAPLG00000015826

Chromosome:

PEDO01009727.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023163

36590 - 40276

3687

ENSAPLT00000016500

36455 - 40276

3822