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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_100906_100993_F

Intron Information:

Intron Rank:
125475
Intron Class:
major
Intron Phase:
Intron Coordinates:
100906 - 100993
Intron Length:
88

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TCA|GTAAGTGTC
5'SS Class:
major
3'SS Sequence:
TCTCTATTTAAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AACTAAC
U12 Branch Point Sequence:
TTTTCTCTATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77.5
0.65
1
73.7
35.7
Major BPS
68
0.45
0.9
67.6
25.3
Major PPT
74.3
0.55
1
74.7
32.9
Minor 5ss
39.4
-1.2
3.3
58.2
40.5
Minor BPS
60.6
0.41
1.9
84.33
36.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000017621
Chromosome:
PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035630
98471 - 109238
10768
ENSAPLT00000025962
98471 - 109238
10768
ENSAPLT00000048407
98471 - 109238
10768