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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_115765_117990_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

115765 - 117990

Intron Length:

2226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGGGA

5'SS Class:

major

3'SS Sequence:

GTTTTCACCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TGTGTTTTCACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

42.1

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

75.8

0.58

0.9

67.2

39.1

Minor 5ss

27.6

-2.6

3.6

38.7

46.4

Minor BPS

52.3

0.05

1.8

65.82

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017352

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020260

115242 - 121977

6736