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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_120164_120462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120164 - 120462

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCATCCCAAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTTCTTCTAACA

Flanking Amino Acid:

VEPSVGGEGKAFITLDPDTA

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

60.7

0.24

55.7

33.7

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

56.1

0.19

1.7

68.77

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017352

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020260

115242 - 121977

6736