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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_122920_123051_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122920 - 123051

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TAACAGTGATTT

Flanking Amino Acid:

AVAVITLGLRVWQLHGSGQC

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.8

38.7

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

1.1

0.4

13.8

Minor 5ss

29.7

-2.3

2.6

33.4

41.8

Minor BPS

37.7

-0.8

2.2

53.79

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015850

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031720

118920 - 124587

5668

ENSAPLT00000020636

120537 - 124961

4425

ENSAPLT00000016518

118461 - 131998

13538