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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_133364_137460_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

133364 - 137460

Intron Length:

4097

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCAGAGCTC

5'SS Class:

major

3'SS Sequence:

AGAGGTTCACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTACCAG

U12 Branch Point Sequence:

AGTGCCACGAGT

Flanking Amino Acid:

YTCAECGKSFGSSDIIVHQR

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.3

0.29

1.3

61.7

39.6

Major BPS

41.8

-0.5

1.6

50.2

43.7

Major PPT

54.7

0.11

1.1

44.7

Minor 5ss

22.5

-3.2

4.3

31.9

Minor BPS

41.9

-0.5

2.1

59.56

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018838

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048456

132595 - 139372

6778