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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_138128_139134_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

138128 - 139134

Intron Length:

1007

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCTTTATG

5'SS Class:

weak_major

3'SS Sequence:

ACTCTTTGTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TAACATGGAAAA

Flanking Amino Acid:

SQELLELWLLELTPTLEKPP

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.12

1.3

58.3

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

55.3

0.12

1.7

40.6

Minor 5ss

30.7

-2.2

3.7

39.3

41.1

Minor BPS

37.9

-0.9

46.54

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018838

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036776

131361 - 139507

8147