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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_138149_138949_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

138149 - 138949

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAACTTTT

5'SS Class:

major

3'SS Sequence:

ACATGGAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GGTCTGCTAACA

Flanking Amino Acid:

QGMEISVFPHGSRTLCGGAD

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.53

1.3

74.1

42.4

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

49.4

-0

1.1

40.9

41.3

Minor 5ss

41.5

-0.9

63.7

43.1

Minor BPS

44.8

-0.4

2.3

59.01

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018838

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025560

132595 - 139372

6778