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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_22588_23236_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22588 - 23236

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGT

5'SS Class:

strong_major

3'SS Sequence:

AATTGCTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TCCACCCCAAAT

Flanking Amino Acid:

AKLLRDAGHKVTILETSSRV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.2

39.5

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

78.4

0.64

0.9

74.1

40.6

Minor 5ss

32.6

-2

3.4

46.8

48.5

Minor BPS

45.7

-0.2

63.23

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016019

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016724

21540 - 26243

4704