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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_64455_67281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

64455 - 67281

Intron Length:

2827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TGGTTTGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TGGTTTGCAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

34.7

Major BPS

58.9

0.22

49.8

35.1

Major PPT

67.3

0.39

1.1

62.3

43.3

Minor 5ss

34.9

-1.7

3.3

49.9

46.4

Minor BPS

-0.3

2.1

59.35

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001804

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001917

64412 - 71741

7330