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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_67709_68550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67709 - 68550

Intron Length:

842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAA

U12 Branch Point Sequence:

CTCTCCAAAGAT

Flanking Amino Acid:

PVQEAVQEYKGQIQAHLQTL

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

79.3

34.3

Major BPS

55.5

0.14

1.3

66.7

39.7

Major PPT

89.8

0.9

0.6

89.3

19.6

Minor 5ss

34.5

-1.8

3.9

49.2

Minor BPS

42.8

-0.4

2.2

61.83

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001804

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032488

62702 - 72741

10040

ENSAPLT00000001917

64412 - 71741

7330