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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_73678_80491_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

73678 - 80491

Intron Length:

6814

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCGCTGGAG

5'SS Class:

weak_major

3'SS Sequence:

GTGGGGGGGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGAGAA

U12 Branch Point Sequence:

GGGTGGAGAAGT

Flanking Amino Acid:

MSLTPKEGIWVRALTTRKVT

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.3

42.9

41.8

Major BPS

45.9

-0.2

1.2

38.4

41.7

Major PPT

46.6

-0.1

1.2

33.7

45.3

Minor 5ss

11.4

-4.5

3.6

10.2

28.4

Minor BPS

-1.2

2.4

47.11

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025521

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042296

71106 - 81943

10838