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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_86771_87658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86771 - 87658

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCCAGGA

5'SS Class:

major

3'SS Sequence:

TTTTTGCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTGCT

Flanking Amino Acid:

PLEEVVQDYKNKLQSHLEPL

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.2

53.3

40.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

86.5

0.82

0.7

84.9

Minor 5ss

28.8

-2.4

3.4

38.8

46.3

Minor BPS

45.7

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022553

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043722

85560 - 91978

6419

ENSAPLT00000029665

85560 - 91978

6419