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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009728.1_89887_90293_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89887 - 90293

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTCTCCTTTTTT

Flanking Amino Acid:

MEKVFSKVPQADITLDPDTA

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

78.2

0.7

77.9

32.1

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

45.8

-0.2

3.6

79.57

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022553

Chromosome:

PEDO01009728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043722

85560 - 91978

6419

ENSAPLT00000029665

85560 - 91978

6419