Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009762.1_186_696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

186 - 696

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTGTCCCCATCC

Flanking Amino Acid:

KDHIDELKAEIRLLRGPLAF

Intron Amino Acid Position:

717

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

69.3

0.43

0.9

62.1

34.8

Minor 5ss

-2.2

3.3

45.6

Minor BPS

45.7

-0.3

2.1

59.24

45.6

Associated Gene:

Gene:

EVI5L

Ensembl Gene ID:

ENSAPLG00000014793

Chromosome:

PEDO01009762.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015443

21 - 8878

8858