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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009762.1_5244_5343_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
5244 - 5343

Intron Length:
100

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGGACG

5'SS Class:
strong_major

3'SS Sequence:
GTGTCCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCCCAG

U12 Branch Point Sequence:
CGTGTCCCAGCC

Flanking Amino Acid:
QVKYNPKKMKRLEKEYAAIK

Intron Amino Acid Position:
366

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85
0.83
0.9
72.1
39.1

Major BPS
42.3
-0.4
1.7
52.1
45.2

Major PPT
69.5
0.44
0.9
62.5
34.6

Minor 5ss
27.1
-2.6
2.9
31.3
42.6

Minor BPS
39.5
-0.8
2
47.52
41.9

Associated Gene:

Gene:
EVI5L

Ensembl Gene ID:

Chromosome:
PEDO01009762.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

463 - 8836
8374

463 - 8836
8374

21 - 8878
8858

21 - 8836
8816