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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009798.1_10800_14771_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10800 - 14771

Intron Length:

3972

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCCAATGGA

5'SS Class:

major

3'SS Sequence:

CTTCAAGTCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTTAT

U12 Branch Point Sequence:

AGAGCTTCAAGT

Flanking Amino Acid:

YLAFERDKHQGHLLCILGGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

38.2

Major BPS

0.5

59.6

38.6

Major PPT

-0

1.7

57.9

41.9

Minor 5ss

16.5

-3.9

3.5

23.6

36.9

Minor BPS

46.3

-0.2

1.9

60.06

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018188

Chromosome:

PEDO01009798.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025590

9147 - 14970

5824