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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009820.1_2035_2116_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2035 - 2116

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

GCGGCACCCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GCCCCCTCACCC

Flanking Amino Acid:

RRLRLQEAANRRFSSSVALT

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

55.4

0.12

43.5

37.8

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

46.7

-0.2

1.9

52.77

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017128

Chromosome:

PEDO01009820.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017607

21 - 3037

3017