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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009820.1_2496_2574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2496 - 2574

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCGGG

5'SS Class:

major

3'SS Sequence:

TGTCGCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

GTGTCACCGACG

Flanking Amino Acid:

PSQAVQKTSLTLSLQRQMME

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

59.8

45.2

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

79.7

0.67

0.9

37.3

Minor 5ss

35.9

-1.6

3.3

43.6

Minor BPS

42.2

-0.7

2.1

50.04

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017128

Chromosome:

PEDO01009820.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017607

21 - 3037

3017