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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009833.1_1998_2239_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1998 - 2239

Intron Length:

242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTAAG

5'SS Class:

major

3'SS Sequence:

CCGCCCGTCCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GCCGGCTGAGGC

Flanking Amino Acid:

HVPRGPPRRQDSPAHGSPPS

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

42.1

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

58.7

0.2

0.9

49.4

34.1

Minor 5ss

-2.3

2.7

33.2

Minor BPS

34.4

-1.2

35.02

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027209

Chromosome:

PEDO01009833.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038531

21 - 2544

2524