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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009842.1_111_461_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

111 - 461

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCATGTCCCAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCACCAT

U12 Branch Point Sequence:

TGTCCCATCACC

Flanking Amino Acid:

VAAGGKDSCQCVPMSYNHIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.9

43.5

Major BPS

0.08

1.4

42.7

Major PPT

56.5

0.15

55.4

Minor 5ss

31.3

-2.1

3.1

40.5

45.6

Minor BPS

52.8

0.07

2.1

70.16

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018523

Chromosome:

PEDO01009842.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029615

42 - 2400

2359