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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009849.1_37982_48936_F

Intron Information:

Intron Rank:

123889

Intron Class:

major

Intron Phase:

Intron Coordinates:

37982 - 48936

Intron Length:

10955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

CCAGTCACAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

91.6

0.94

0.6

84.4

30.5

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

39.8

-0.9

1.8

36.26

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016790

Chromosome:

PEDO01009849.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035120

37824 - 106967

69144