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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009854.1_1089_1538_R

Intron Information:

Intron Rank:

129129

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1089 - 1538

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

TGG|GTCACTTAG

5'SS Class:

weak_major

3'SS Sequence:

GGGTCACTTGTGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTTAT

U12 Branch Point Sequence:

TTGTGGGTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.18

1.5

56.7

Major BPS

71.3

0.53

61.3

Major PPT

37.5

-0.7

3.1

47.8

40.6

Minor 5ss

40.1

-1.1

2.6

41.3

45.1

Minor BPS

38.4

-0.8

66.78

49.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016669

Chromosome:

PEDO01009854.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023207

21 - 1696

1676