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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009854.1_992_1251_R

Intron Information:

Intron Rank:

129136

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

992 - 1251

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

TGG|GTCAGTTCT

5'SS Class:

major

3'SS Sequence:

GGGTCACTTGTGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCGCTAT

U12 Branch Point Sequence:

TTGTGGGTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.3

72.3

40.1

Major BPS

48.4

-0.1

1.5

46.4

46.5

Major PPT

37.5

-0.7

3.1

47.8

40.6

Minor 5ss

37.8

-1.4

2.8

43.4

43.5

Minor BPS

38.4

-0.8

66.78

49.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016669

Chromosome:

PEDO01009854.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036307

21 - 1343

1323