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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009868.1_3244_3377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3244 - 3377

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

ACCCCGCTAACG

Flanking Amino Acid:

RVNLSEARVQVWFQNRRAKF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

57.1

0.18

1.1

Major PPT

0.56

0.9

69.2

31.3

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

-0.6

2.3

47.69

45.3

Associated Gene:

Gene:

PRRX2

Ensembl Gene ID:

ENSAPLG00000008227

Chromosome:

PEDO01009868.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008546

2417 - 3488

1072