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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009872.1_1290_1671_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1290 - 1671

Intron Length:
382

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACTTGGG

5'SS Class:
major

3'SS Sequence:
TGCCCCATCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCCGAC

U12 Branch Point Sequence:
TCTGCCCCATCC

Flanking Amino Acid:
FETRFVSQIESDSGDRKQIY

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.3
0.55
1.1
60.1
44.8

Major BPS
48.5
-0
1.3
46
38.7

Major PPT
67.8
0.4
0.9
58.2
37.1

Minor 5ss
31.1
-2.2
3.3
41.2
45.1

Minor BPS
44.4
-0.4
2.1
59.12
45.7

Associated Gene:

Gene:
GCK

Ensembl Gene ID:

Chromosome:
PEDO01009872.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15 - 2168
2154