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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009877.1_209_572_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

209 - 572

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCTCTGCCA

5'SS Class:

weak_major

3'SS Sequence:

CAGCTACAGCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GTTTGCTCAGCT

Flanking Amino Acid:

CPFQWWLFTAMGFLLFQKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.23

1.4

49.2

41.2

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

46.4

-0.2

1.2

38.7

38.2

Minor 5ss

16.1

-3.9

3.5

23.3

36.5

Minor BPS

50.9

0.11

2.2

77.32

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028164

Chromosome:

PEDO01009877.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048031

12 - 600

589