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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009878.1_3086_3252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3086 - 3252

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCGAG

5'SS Class:

major

3'SS Sequence:

AGCCCCTCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGGAA

U12 Branch Point Sequence:

TGTGCTGGAAGA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

63.2

43.4

Major BPS

42.9

-0.4

1.4

42.3

Major PPT

70.7

0.47

0.9

35.2

Minor 5ss

31.1

-2.2

3.2

37.8

47.1

Minor BPS

-0.6

2.3

56.25

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005391

Chromosome:

PEDO01009878.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005575

21 - 3469

3449