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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009880.1_1354_1580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1354 - 1580

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAC

U12 Branch Point Sequence:

CCCCCAGTACCC

Flanking Amino Acid:

MRIISSHGCKVDNSSLTGES

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

54.6

0.11

1.2

64.4

33.8

Major PPT

61.3

0.25

1.1

53.5

41.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

38.1

-0.9

2.3

44.17

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016891

Chromosome:

PEDO01009880.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039310

111 - 3198

3088