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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009891.1_111978_113415_R

Intron Information:

Intron Rank:

144224

Intron Class:

major

Intron Phase:

Intron Coordinates:

111978 - 113415

Intron Length:

1438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

TCTGCCTCACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

73.1

0.52

69.3

36.9

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

51.8

0.04

66.23

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024856

Chromosome:

PEDO01009891.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045553

111969 - 116628

4660