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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009891.1_8346_8678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8346 - 8678

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAACAAA

5'SS Class:

major

3'SS Sequence:

GCCTCTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAG

U12 Branch Point Sequence:

TCTGGCTCATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.1

61.5

38.9

Major BPS

53.7

0.09

1.5

38.9

Major PPT

0.45

0.9

63.3

37.1

Minor 5ss

40.2

-1.1

53.6

44.6

Minor BPS

-0.3

2.2

63.32

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011759

Chromosome:

PEDO01009891.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033530

6702 - 9238

2537