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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009905.1_258_1186_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

258 - 1186

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGCGG

5'SS Class:

major

3'SS Sequence:

CACCCCAAAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTCACCCCAAAA

Flanking Amino Acid:

QKFAAQELIEPDAPAAPRTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

51.5

46.7

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

54.2

0.09

47.7

32.6

Minor 5ss

23.6

-3

3.2

29.6

43.2

Minor BPS

47.2

-0.2

62.92

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024916

Chromosome:

PEDO01009905.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024194

21 - 1643

1623