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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009926.1_4614_4939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4614 - 4939

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCACT

5'SS Class:

major

3'SS Sequence:

TCTTTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TGAACCGAAATT

Flanking Amino Acid:

VLKEVLLEFKENLRFELEND

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

71.4

40.3

Major BPS

58.9

0.22

49.8

35.1

Major PPT

89.5

0.89

0.6

22.6

Minor 5ss

36.1

-1.6

2.9

41.9

44.5

Minor BPS

-0.2

2.3

66.22

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029907

Chromosome:

PEDO01009926.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038047

21 - 7237

7217