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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009942.1_1845_2187_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1845 - 2187

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CGGCTCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

ACACCATCACCA

Flanking Amino Acid:

MVKVYSFEFKKPSCCFCCPE

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.2

36.1

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

72.4

0.5

0.9

65.4

36.1

Minor 5ss

32.3

-2

2.6

35.2

34.2

Minor BPS

42.4

-0.5

1.9

49.94

40.4

Associated Gene:

Gene:

SERINC4

Ensembl Gene ID:

ENSAPLG00000006569

Chromosome:

PEDO01009942.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006812

21 - 3935

3915