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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009952.1_1405_1553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1405 - 1553

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTGACACCAACC

Flanking Amino Acid:

SVTELIQVSRTPVVTGTGPN

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

74.9

0.56

0.7

68.3

25.5

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

42.5

-0.5

2.1

53.63

43.4

Associated Gene:

Gene:

NFIC

Ensembl Gene ID:

ENSAPLG00000023294

Chromosome:

PEDO01009952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039516

21 - 10593

10573